miRBase entry: mdo-mir-7398m

Stem-loop mdo-mir-7398m


Accession
MI0024024
Description
Monodelphis domestica mdo-mir-7398m precursor miRNA
Gene family
MIPF0001643; mir-7398


Sequence

849 reads, 16 reads per million, 5 experiments
UGUGUAGAGGUAAGAAAUAUGCuguguucucgcuugguAUAUUUCUUGCCUCUACCAAU
((.(((((((((((((((((((((((....)))..))))))))))))))))))))))..

Structure
--  U                    --   u 
  UG GUAGAGGUAAGAAAUAUGCu  gug u
  || ||||||||||||||||||||  |||  
  AC CAUCUCCGUUCUUUAUAugg  cgc c
UA  -                    uu   u 


Annotation confidence High
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Genome context
chrX: 57287463-57287521 [+]
Clustered miRNAs
18 other miRNAs are < 10 kb from mdo-mir-7398m
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398m-5p

Accession MIMAT0028912
Description Monodelphis domestica mdo-miR-7398m-5p mature miRNA
Sequence 1 - UGUGUAGAGGUAAGAAAUAUGC - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7398m-3p

Accession MIMAT0028913
Description Monodelphis domestica mdo-miR-7398m-3p mature miRNA
Sequence 39 - AUAUUUCUUGCCUCUACCAAU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45