Stem-loop mdo-mir-7398q

Accession

MI0024032

Description

Monodelphis domestica mdo-mir-7398q precursor miRNA

Gene family

MIPF0001643; mir-7398

Sequence

651 reads, 13 reads per million, 5 experiments

UGUGUAGAGGCGUGAAAGGUGCuguguucucucucagcAAAUUUCUUGCCUUUUGCAGC
..((((((((((.((((..(((((.(......).)))))..)))).)))).))))))..

Structure

UG      -    U    GG     u uu 
  UGUAGA GGCG GAAA  UGCug g  c
  |||||| |||| ||||  ||||| |   
  ACGUUU CCGU CUUU  Acgac c  u
CG      U    U    AA     u uc 

Annotation confidence Not enough data

Genome context

chrX: 57297040-57297098 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from mdo-mir-7398q

Mature mdo-miR-7398q-5p

• Accession: MIMAT0028920
• Description: Monodelphis domestica mdo-miR-7398q-5p mature miRNA
• Sequence: 1 - UGUGUAGAGGCGUGAAAGGUGC - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398q-3p

• Accession: MIMAT0028921
• Description: Monodelphis domestica mdo-miR-7398q-3p mature miRNA
• Sequence: 39 - AAAUUUCUUGCCUUUUGCAGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45