Stem-loop mdo-mir-7398u

Accession

MI0024035

Description

Monodelphis domestica mdo-mir-7398u precursor miRNA

Gene family

MIPF0001643; mir-7398

Sequence

396 reads, 9 reads per million, 5 experiments

CUCGUAGAGACAAGAAAGUUACUguaaucugucaggUAAUUUUCUUAUCUCUCGAAGU
.(((.(((((.(((((((((((((........)).))))))))))).))))))))...

Structure

--C   U     C           -  uaa 
   UCG AGAGA AAGAAAGUUAC Ug   u
   ||| ||||| ||||||||||| ||    
   AGC UCUCU UUCUUUUAAUg ac   c
UGA   -     A           g  ugu 

Annotation confidence Not enough data

Genome context

chrX: 57301459-57301516 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mdo-mir-7398u

Mature mdo-miR-7398u-5p

• Accession: MIMAT0028926
• Description: Monodelphis domestica mdo-miR-7398u-5p mature miRNA
• Sequence: 1 - CUCGUAGAGACAAGAAAGUUACU - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398u-3p

• Accession: MIMAT0028927
• Description: Monodelphis domestica mdo-miR-7398u-3p mature miRNA
• Sequence: 37 - UAAUUUUCUUAUCUCUCGAAGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45