miRBase entry: mdo-mir-7399

Stem-loop mdo-mir-7399


Accession
MI0024042
Description
Monodelphis domestica mdo-mir-7399 precursor miRNA


Sequence

27 reads, 2 reads per million, 2 experiments
CACAUACAUAUAUAGACGUGUAuguauaucuaaguaUACGCAUGUAUAUGUAUGCAUG
..((((((((((((..(((((((..........)))))))..))))))))))))....

Structure
--CA            GA       guau 
    CAUACAUAUAUA  CGUGUAu    a
    ||||||||||||  |||||||     
    GUAUGUAUAUGU  GCAUaug    u
GUAC            AC       aauc 


Annotation confidence Not enough data
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Genome context
chrX: 57326899-57326956 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mdo-mir-7399
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7399-5p

Accession MIMAT0028940
Description Monodelphis domestica mdo-miR-7399-5p mature miRNA
Sequence 1 - CACAUACAUAUAUAGACGUGUA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7399-3p

Accession MIMAT0028941
Description Monodelphis domestica mdo-miR-7399-3p mature miRNA
Sequence 37 - UACGCAUGUAUAUGUAUGCAUG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45