miRBase entry: mes-MIR156a

Stem-loop mes-MIR156a


Accession
MI0024207
Description
Manihot esculenta mes-MIR156a precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
6 open access papers mention mes-MIR156a
(19 sentences)

Sequence

aggagggUGACAGAAGAGAGUGAGCACgcauggcuuucgugcauggcuguucaugcuugaagcuaugagugcucacccucuaucugucgcccaccu
(((.((((((((((((((.((((((((.((((((((.((.(((((......))))).)))))))))).)))))))).)))).)))))))))).)))

Structure
   a          -    A        g        u  u     gc 
agg gggUGACAGA AGAG GUGAGCAC cauggcuu cg gcaug  u
||| |||||||||| |||| |||||||| |||||||| || |||||   
ucc cccgcugucu ucuc cacucgug guaucgaa gu cguac  g
   a          a    c        a        -  u     uu 


Annotation confidence Not enough data
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Genome context
scaffold10493: 934623-934718 [-]

Database links

Mature mes-miR156a

Accession MIMAT0029165
Description Manihot esculenta mes-miR156a mature miRNA
Sequence 8 - UGACAGAAGAGAGUGAGCAC - 27
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269