Stem-loop mes-MIR162

Accession

MI0024229

Description

Manihot esculenta mes-MIR162 precursor miRNA

Literature search

3 open access papers mention mes-MIR162
(5 sentences)

Sequence

cuggaggcagcgguucaucgaucucuuccuggaggauuuuguuguggaauuaacacaaacacaugaaucgaUCGAUAAACCUCUGCAUCCAG
(((((.((((.((((.((((((((((....))).((((((((((((.......))).))))...)))))))))))).)))).)))).)))))

Structure

     g    c    c       ucuuccuggag     ---    -   ga 
cugga gcag gguu aucgauc           gauuu   uguu gug  a
||||| |||| |||| |||||||           |||||   |||| |||  u
GACCU CGUC CCAA UAGCUag           cuaag   acaa cac  u
     A    U    A       -----------     uac    a   aa 

Annotation confidence Not enough data

Genome context

scaffold07762: 294285-294376 [-]

Mature mes-miR162

• Accession: MIMAT0029187
• Description: Manihot esculenta mes-miR162 mature miRNA
• Sequence: 72 - UCGAUAAACCUCUGCAUCCAG - 92
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269