Stem-loop mes-MIR166d

Accession

MI0024237

Description

Manihot esculenta mes-MIR166d precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

6 open access papers mention mes-MIR166d
(16 sentences)

Sequence

uugaggggaauguugucuggcucgaggacucucuuuugaugcuuuuacauacagaucuaagcauauugaucaacugcuagugucgUCGGACCAGGCUUCAUUCCCCccaa
.((.((((((((..((((((.((((.(((.(((..(((((((((..............)))))......))))..)..)).))).)))).))))))..)))))))).)).

Structure

u  a        uu      c    g   u  -- uu    ------     uuacau 
 ug ggggaaug  gucugg ucga gac cu  c  uuga      ugcuu      a
 || ||||||||  |||||| |||| ||| ||  |  ||||      |||||       
 ac CCCCUUAC  CGGACC GGCU cug ga  g  aacu      acgaa      c
a  c        UU      A    g   u  uc uc    aguuau     ucuaga 

Annotation confidence Not enough data

Genome context

scaffold03581: 311203-311312 [-]

Mature mes-miR166d

• Accession: MIMAT0029195
• Description: Manihot esculenta mes-miR166d mature miRNA
• Sequence: 86 - UCGGACCAGGCUUCAUUCCCC - 106
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269