Stem-loop sequence mes-MIR166f

Accession

MI0024239 (change log)

Description

Manihot esculenta miR166f stem-loop

Gene family

MIPF0000004; MIR166

Literature search

6 open access papers mention mes-MIR166f
(16 sentences)

Stem-loop

   u  a        uu      cu   g c        agaucuaugauuuuaucucugaaaucauuaauu 
5'  ug ggggaaug  gucugg  cga g cacuaacu                                 u
    || ||||||||  ||||||  ||| | ||||||||                                 a
3'  ac ccccuuac  cggacc  gcu c gugauuga                                 a
   a  c        uu      ag   g a        guacuauuuaguauagaguuguugcuuuuacuu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold00977: 63690-63830 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024239

Mature sequence mes-miR166f

• Accession: MIMAT0029197
• Sequence: 117 - ucggaccaggcuucauucccc - 137
• Evidence: not experimental

References

1. PMID:22388699 "Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)" Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J Mol Biotechnol. 53:257-269(2013).