miRBase entry: mes-MIR169a

Stem-loop mes-MIR169a


Accession
MI0024251
Description
Manihot esculenta mes-MIR169a precursor miRNA
Gene family
MIPF0000037; MIR169_2

Literature search
10 open access papers mention mes-MIR169a
(29 sentences)

Sequence

augCAGCCAAGGAUGACUUGCCGGcguuugcuuagugaccuaucuagauuuggcauauaccucaagccggcaagcuguucuuggcuacau
(((.(((((((((((.(((((((((.........(((.((...........))))).........))))))))).))))))))))).)))

Structure
   C           A         guuugcuua   a  uauc 
aug AGCCAAGGAUG CUUGCCGGc         gug cc    u
||| ||||||||||| |||||||||         ||| ||    a
uac ucgguucuugu gaacggccg         uac gg    g
   a           c         aacuccaua   -  uuua 


Annotation confidence Not enough data
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Genome context
scaffold12448: 44913-45002 [-]

Database links

Mature mes-miR169a

Accession MIMAT0029209
Description Manihot esculenta mes-miR169a mature miRNA
Sequence 4 - CAGCCAAGGAUGACUUGCCGG - 24
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269