Stem-loop mes-MIR169b

Accession

MI0024252

Description

Manihot esculenta mes-MIR169b precursor miRNA

Gene family

MIPF0000037; MIR169_2

Literature search

10 open access papers mention mes-MIR169b
(30 sentences)

Sequence

CAGCCAAGGAUGACUUGCCGGcuagcucuuguagcaugcuuauacuuugccauuaacuaaggaugaugugucuggccaguagaugaucggcaagucaucucuggcua
.(((((.(((((((((((((((((.......)))).......((((..((((...((..........))...)))).))))......))))))))))))).))))).

Structure

C     A             ----------------------------------------------------    gc 
 AGCCA GGAUGACUUGCCG                                                    Gcua  u
 ||||| |||||||||||||                                                    ||||  c
 ucggu ucuacugaacggc                                                    cgau  u
a     c             uaguagaugaccggucuguguaguaggaaucaauuaccguuucauauucgua    gu 

Annotation confidence Not enough data

Genome context

scaffold11581: 1504070-1504176 [+]

Mature mes-miR169b

• Accession: MIMAT0029210
• Description: Manihot esculenta mes-miR169b mature miRNA
• Sequence: 1 - CAGCCAAGGAUGACUUGCCGG - 21
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269