Stem-loop sequence mes-MIR169e

Accession

MI0024255 (change log)

Description

Manihot esculenta miR169e stem-loop

Gene family

MIPF0000037; MIR169_2

Literature search

10 open access papers mention mes-MIR169e
(30 sentences)

Stem-loop

       u            uc       -g ug         aaacacug 
5' gagg agagaguguaau  agccaag  a  acuugccgg        c
   |||| ||||||||||||  |||||||  |  |||||||||         
3' cuuc uuucucauguug  ucgguuc  u  ugaacggcc        g
       u            ua       ga gu         guuucuac 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold03049: 886480-886576 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024255

Mature sequence mes-miR169e

• Accession: MIMAT0029213
• Sequence: 19 - cagccaaggaugacuugccgg - 39
• Evidence: not experimental

References

1. PMID:22388699 "Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)" Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J Mol Biotechnol. 53:257-269(2013).