Stem-loop sequence mes-MIR169aa

Accession

MI0024277 (change log)

Description

Manihot esculenta miR169aa stem-loop

Gene family

MIPF0000012; MIR169_1

Literature search

10 open access papers mention mes-MIR169aa
(28 sentences)

Stem-loop

      u   -         u    u      aacuucauuggaagagaauuuuuauauau 
5' guu ggu agccaagga gacu gccugc                             a
   ||| ||| ||||||||| |||| ||||||                             g
3' cag cua ucgguuccu cugg uggaug                             a
      u   a         -    -      auguuguuuauuuuguucugaaaagacgg 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold00363: 71664-71779 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024277

Mature sequence mes-miR169aa

• Accession: MIMAT0029235
• Sequence: 7 - uagccaaggaugacuugccug - 27
• Evidence: not experimental

References

1. PMID:22388699 "Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)" Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J Mol Biotechnol. 53:257-269(2013).