Stem-loop mes-MIR171i

Accession

MI0024287

Description

Manihot esculenta mes-MIR171i precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

7 open access papers mention mes-MIR171i
(16 sentences)

Sequence

ugaaauagcgauugugauauuggccugguucacucagacauggaaaaccuacccuuaauuucuugcuucuuuugcuugagugaagggugguguugucuuguuuUGAUUGAGCCGUGCCAAUAUCucaguucucuuuca
(((((.((.(((((.(((((((((.(((((((.(((((((.(((.(((((((((((...(((..((.......))..)))..)))))))).))).))))).))))).))))))).))))))))).))))))).)))))

Structure

     u  c     u         c       c     -  u   a   -        aau   uu  uu 
ugaaa ag gauug gauauuggc ugguuca ucaga ca gga aac cuacccuu   uuc  gc  c
||||| || ||||| ||||||||| ||||||| ||||| || ||| ||| ||||||||   |||  ||  u
acuuu uc uugac CUAUAACCG GCCGAGU AGUuu gu ucu uug ggugggaa   gag  cg  u
     c  -     u         U       U     u  -   g   u        -gu   uu  uu 

Annotation confidence Not enough data

Genome context

scaffold07520: 2504286-2504423 [+]

Mature mes-miR171i

• Accession: MIMAT0029245
• Description: Manihot esculenta mes-miR171i mature miRNA
• Sequence: 104 - UGAUUGAGCCGUGCCAAUAUC - 124
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269