miRBase entry: mes-MIR394c

Stem-loop mes-MIR394c


Accession
MI0024309
Description
Manihot esculenta mes-MIR394c precursor miRNA
Gene family
MIPF0000100; MIR394

Literature search
3 open access papers mention mes-MIR394c
(26 sentences)

Sequence

uugcagagccauuUUGGCAUUCUGUCCACCUCCAUauauaagaguuuaauaauaauucuuggagguggccagcaugccaaacuggcucuguaa
.((((((((((.((((((((.(((.(((((((((......((((((.......))))))))))))))).))).)))))))).)))))))))).

Structure
u          u        U   U         Uauaua      ua 
 ugcagagcca uUUGGCAU CUG CCACCUCCA      agaguu  a
 |||||||||| |||||||| ||| |||||||||      ||||||  u
 augucucggu aaaccgua gac gguggaggu      ucuuaa  a
a          c        c   c         ------      ua 


Annotation confidence Not enough data
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Genome context
scaffold06914: 512410-512502 [-]

Database links

Mature mes-miR394c

Accession MIMAT0029267
Description Manihot esculenta mes-miR394c mature miRNA
Sequence 14 - UUGGCAUUCUGUCCACCUCCAU - 35
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269