Stem-loop sequence mes-MIR394c

Accession

MI0024309 (change log)

Description

Manihot esculenta miR394c stem-loop

Gene family

MIPF0000100; MIR394

Literature search

3 open access papers mention mes-MIR394c
(26 sentences)

Stem-loop

   u          u        u   u         uauaua      ua 
5'  ugcagagcca uuuggcau cug ccaccucca      agaguu  a
    |||||||||| |||||||| ||| |||||||||      ||||||  u
3'  augucucggu aaaccgua gac gguggaggu      ucuuaa  a
   a          c        c   c         ------      ua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold06914: 512410-512502 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024309

Mature sequence mes-miR394c

• Accession: MIMAT0029267
• Sequence: 14 - uuggcauucuguccaccuccau - 35
• Evidence: not experimental

References

1. PMID:22388699 "Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)" Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J Mol Biotechnol. 53:257-269(2013).