miRBase entry: mes-MIR396e

Stem-loop mes-MIR396e


Accession
MI0024319
Description
Manihot esculenta mes-MIR396e precursor miRNA
Gene family
MIPF0000047; MIR396

Literature search
3 open access papers mention mes-MIR396e
(13 sentences)

Sequence

gucaugcuuUUCCACAGCUUUCUUGAACUUucuuuuacugcuuaggaagcucaagaaagcugugggagaacauggc
((((((.(((((((((((((((((((.((((((..........)))))).))))))))))))))))))).))))))

Structure
      c                   A      uuua 
gucaug uuUUCCACAGCUUUCUUGA CUUucu    c
|||||| ||||||||||||||||||| ||||||     
cgguac agagggugucgaaagaacu gaagga    u
      a                   c      uucg 


Annotation confidence Not enough data
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Genome context
scaffold05297: 20534-20609 [-]

Database links

Mature mes-miR396e

Accession MIMAT0029277
Description Manihot esculenta mes-miR396e mature miRNA
Sequence 10 - UUCCACAGCUUUCUUGAACUU - 30
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269