Stem-loop mes-MIR399f

Accession

MI0024326

Description

Manihot esculenta mes-MIR399f precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

6 open access papers mention mes-MIR399f
(8 sentences)

Sequence

cggucgcagggcaccucucgcuuggcagguacuuaaugggauaccaauauuugaucucaucucaaucgugacuUGCCAAAGGAGAGUUGCCCUGugauug
(((((((((((((.(((((..(((((((((......((((((................))))))......)))))))))..))))).)))))))))))))

Structure

             c     gc         acuuaa      accaaua 
cggucgcagggca cucuc  uuggcaggu      ugggau       u
||||||||||||| |||||  |||||||||      ||||||        
guuaguGUCCCGU GAGAG  AACCGUuca      acucua       u
             U     GA         gugcua      cucuagu 

Annotation confidence Not enough data

Genome context

scaffold11425: 531795-531894 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mes-MIR399f

Mature mes-miR399f

• Accession: MIMAT0029284
• Description: Manihot esculenta mes-miR399f mature miRNA
• Sequence: 74 - UGCCAAAGGAGAGUUGCCCUG - 94
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269