miRBase entry: mes-MIR399g

Stem-loop mes-MIR399g


Accession
MI0024327
Description
Manihot esculenta mes-MIR399g precursor miRNA
Gene family
MIPF0000015; MIR399

Literature search
6 open access papers mention mes-MIR399g
(8 sentences)

Sequence

cagggcaaaaccuccauuggcaugcagccacacuaagauucucuauccuuguugugcauuccuauagugugcuccaUGCCAAAGGAGAUUUGCCCGG
..(((((((..((((.((((((((.(((.((((((((........................)).))))))))).)))))))).)))).)))))))..

Structure
ca       ac    a        c   c      -  auucucuaucc 
  gggcaaa  cucc uuggcaug agc acacua ag           u
  |||||||  |||| |||||||| ||| |||||| ||            
  CCCGUUU  GAGG AACCGUac ucg ugugau uc           u
GG       -A    A        c   -      a  cuuacguguug 


Annotation confidence Not enough data
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Genome context
scaffold04003: 23587-23683 [-]

Database links

Mature mes-miR399g

Accession MIMAT0029285
Description Manihot esculenta mes-miR399g mature miRNA
Sequence 77 - UGCCAAAGGAGAUUUGCCCGG - 97
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269