miRBase entry: mes-MIR477f

Stem-loop mes-MIR477f


Accession
MI0024337
Description
Manihot esculenta mes-MIR477f precursor miRNA
Gene family
MIPF0000216; MIR477

Literature search
3 open access papers mention mes-MIR477f
(6 sentences)

Sequence

gaaggagaaguuccaAUCUCCCUCAAAGGCUUCCAauauuccaggcuaaucauaagauuuaucuaagaauuuugggagccuuugaaggggauugaaggcuuacuccauc
...(((((((((.((((((((.((((((((((((((.((((.(((..((((....))))..)))..)))).)))))))))))))).))))))))..))))).))))...

Structure
gaa    -     -c        C              u    -c   cu    a 
   ggag aaguu  caAUCUCC UCAAAGGCUUCCAa auuc  agg  aauc u
   |||| |||||  |||||||| |||||||||||||| ||||  |||  ||||  
   ccuc uucgg  guuagggg aguuuccgaggguu uaag  ucu  uuag a
cua    a     aa        a              u    aa   au    a 


Annotation confidence Not enough data
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Genome context
scaffold04043: 624312-624420 [-]

Database links

Mature mes-miR477f

Accession MIMAT0029295
Description Manihot esculenta mes-miR477f mature miRNA
Sequence 16 - AUCUCCCUCAAAGGCUUCCA - 35
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269