miRBase entry: mes-MIR1446

Stem-loop mes-MIR1446


Accession
MI0024347
Description
Manihot esculenta mes-MIR1446 precursor miRNA

Literature search
1 open access papers mention mes-MIR1446
(1 sentences)

Sequence

uagagacucagcuuuUUCUGAACUCUCUCCCUCAUaggcuucucaaaacuugccuaucaaaccuccacauaaauuggcaagauugagaagaagccuauggugagaaaguucaaaaaaaguuugguucucug
((((((((.((((((((.((((((.((((.(.((((((((((((((..((((((.....................)))))).))))))...))))))))).)))).)))))).)))))))).)).))))))

Structure
      -  c        C      C    C U        ---      aa      uaucaaacc 
uagaga cu agcuuuUU UGAACU UCUC C CAUaggcu   ucucaa  cuugcc         u
|||||| || |||||||| |||||| |||| | ||||||||   ||||||  ||||||         c
gucucu gg uugaaaaa acuuga agag g guauccga   agaguu  gaacgg         c
      u  u        a      a    u -        aga      -a      uuaaauaca 


Annotation confidence Not enough data
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Genome context
scaffold12262: 17213-17343 [+]

Database links

Mature mes-miR1446

Accession MIMAT0029305
Description Manihot esculenta mes-miR1446 mature miRNA
Sequence 16 - UUCUGAACUCUCUCCCUCAU - 35
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269