Stem-loop sequence mes-MIR2275

Accession

MI0024350 (change log)

Description

Manihot esculenta miR2275 stem-loop

Literature search

2 open access papers mention mes-MIR2275
(9 sentences)

Stem-loop

       u   -     a       -         cu    accuuuuu 
5' caca auc uugaa gugagau uuggaggaa  caaa        g
   |||| ||| ||||| ||||||| |||||||||  ||||        u
3' gugu ugg aacuu cauucua aaccuccuu  guuu        a
       u   u     c       u         ug    cgucuaua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold03614: 1186825-1186917 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024350

Mature sequence mes-miR2275

• Accession: MIMAT0029308
• Sequence: 56 - uuugguuuccuccaauaucuua - 77
• Evidence: not experimental

References

1. PMID:22388699 "Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)" Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J Mol Biotechnol. 53:257-269(2013).