Stem-loop sequence mes-MIR2950

Accession

MI0024351 (change log)

Description

Manihot esculenta miR2950 stem-loop

Literature search

1 open access papers mention mes-MIR2950
(2 sentences)

Stem-loop

           u               u         ug a     aaauuucg  ca 
5' cauggguu augguguauuccauc cuugcacac  g ccagu        gc  c
   |||||||| ||||||||||||||| |||||||||  | |||||        ||  u
3' guaucuag uacuacauaagguag gaacgugug  u gguca        cg  u
           u               u         gu -     --------  ac 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold03235: 191672-191775 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024351

Mature sequence mes-miR2950

• Accession: MIMAT0029309
• Sequence: 18 - uuccaucucuugcacacugga - 38
• Evidence: not experimental

References

1. PMID:22388699 "Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)" Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J Mol Biotechnol. 53:257-269(2013).