Stem-loop lja-MIR7526d

Accession

MI0024404

Description

Lotus japonicus lja-MIR7526d precursor miRNA

Gene family

MIPF0001651; MIR7526

Sequence

auagcuguaacguccgcuAUCAAGGUAGCUGUAACUUCCgcuauuaagauagcaguuacagcuaucuugauagcggaaguuacagcuaucuugauagcggaaguuacagcuau
(((((((((((.(((((((((((((((((((((((((((((((((((((((((.......))))))))))))))))))))))))))))))))))))))))).)))))))))))

Structure

           g                                         ag 
auagcuguaac uccgcuAUCAAGGUAGCUGUAACUUCCgcuauuaagauagc  u
||||||||||| |||||||||||||||||||||||||||||||||||||||||  u
uaucgacauug aggcgauaguucuaucgacauugaaggcgauaguucuaucg  a
           a                                         ac 

Annotation confidence Not enough data

Genome context

Chr4: 10985453-10985565 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from lja-MIR7526d

Mature lja-miR7526d

• Accession: MIMAT0029345
• Description: Lotus japonicus lja-miR7526d mature miRNA
• Sequence: 19 - AUCAAGGUAGCUGUAACUUCC - 39
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154