miRBase entry: lja-MIR7536a

Stem-loop lja-MIR7536a


Accession
MI0024420
Description
Lotus japonicus lja-MIR7536a precursor miRNA
Gene family
MIPF0001779; MIR7536


Sequence

uacuuuagagugaugucuuugcaggggaaaagauguuguugguuuuugagccugguaauuUAAGACAUGCUCAAGAGUG
((((((.((((.(((((((..((((...((((((.......))))))...)))).......))))))))))).))))))

Structure
      a    g       -----ug    gga      gu 
uacuuu gagu augucuu       cagg   aaagau  u
|||||| |||| |||||||       ||||   ||||||  g
GUGAGA CUCG UACAGAA       gucc   uuuuug  u
      A    -       Uuuaaug    gag      gu 


Annotation confidence Not enough data
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Genome context
Chr2: 18227564-18227642 [+]

Database links

Mature lja-miR7536a

Accession MIMAT0029361
Description Lotus japonicus lja-miR7536a mature miRNA
Sequence 61 - UAAGACAUGCUCAAGAGUG - 79
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23071252
    Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
    "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
    "Plant Physiol (2012) 160:2137-2154