miRBase entry: ipu-let-7a-3

Stem-loop ipu-let-7a-3


Accession
MI0024435
Description
Ictalurus punctatus ipu-let-7a-3 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
1 open access papers mention ipu-let-7a-3
(6 sentences)

Sequence

UGAGGUAGUAGGUUGUAUAGUUugaggguuuaacccuugcugucagauaacuauacaacuuacugucuuucc
.((((((((((((((((((((((((((((...))))))).........)))))))))))))))))))))...

Structure
--U                     ---------       u 
   GAGGUAGUAGGUUGUAUAGUU         ugagggu  
   |||||||||||||||||||||         ||||||| u
   uucugucauucaacauaucaa         guuccca  
ccu                     uagacuguc       a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-let-7a

Accession MIMAT0029374
Description Ictalurus punctatus ipu-let-7a mature miRNA
Sequence 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174