miRBase entry: ipu-let-7h

Stem-loop ipu-let-7h


Accession
MI0024451
Description
Ictalurus punctatus ipu-let-7h precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
1 open access papers mention ipu-let-7h
(5 sentences)

Sequence

UGAGGUAGUAAGUUGUGUUGUUguuggggaucaguauaguauggcccuugaaggagauaacuauacaauuuacugccuucc
.(((((((((((((((((.((((((((((.(((........))))))).......)))))).)))))))))))))))))..

Structure
-U                 U      -------    a   gua 
  GAGGUAGUAAGUUGUGU GUUguu       gggg uca   u
  ||||||||||||||||| ||||||       |||| |||    
  uuccgucauuuaacaua caauag       uccc ggu   a
cc                 u      aggaagu    -   aug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-let-7h

Accession MIMAT0029381
Description Ictalurus punctatus ipu-let-7h mature miRNA
Sequence 1 - UGAGGUAGUAAGUUGUGUUGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174