miRBase entry: ipu-mir-101a

Stem-loop ipu-mir-101a


Accession
MI0024458
Description
Ictalurus punctatus ipu-mir-101a precursor miRNA
Gene family
MIPF0000046; mir-101

Literature search
1 open access papers mention ipu-mir-101a
(1 sentences)

Sequence

ucaguuaucacagugcugaugcuguccaucuuaaaggUACAGUACUGUGAUAACUGAAG
((((((((((((((((((.((((............))))))))))))))))))))))..

Structure
--                  a    gucca 
  ucaguuaucacagugcug ugcu     u
  |||||||||||||||||| ||||      
  AGUCAAUAGUGUCAUGAC AUgg     c
GA                  -    aaauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-101a

Accession MIMAT0029386
Description Ictalurus punctatus ipu-miR-101a mature miRNA
Sequence 38 - UACAGUACUGUGAUAACUGAAG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174