miRBase entry: ipu-mir-103-2

Stem-loop ipu-mir-103-2


Accession
MI0024461
Description
Ictalurus punctatus ipu-mir-103-2 precursor miRNA
Gene family
MIPF0000024; mir-103


Sequence

ugagccucuuuacaaugcugccuuguagacccagaaucaAGCAGCAUUGUACAGGGCUAUGA
..((((.((.(((((((((((.(((............)))))))))))))).))))))....

Structure
--ug    u  u           c   uagac 
    agcc cu uacaaugcugc uug     c
    |||| || ||||||||||| |||      
    UCGG GA AUGUUACGACG Aac     c
AGUA    -  C           -   uaaga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-103

Accession MIMAT0029388
Description Ictalurus punctatus ipu-miR-103 mature miRNA
Sequence 40 - AGCAGCAUUGUACAGGGCUAUGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174