Stem-loop ipu-mir-125c

Accession

MI0024480

Description

Ictalurus punctatus ipu-mir-125c precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

UCCCUGAGACCCUAACUCGUGAggucuuuuuccaaaaucacgggucaggagcuugggagac
((((((((..(((.((((((((((.......))....)))))))).)))..)))))).)).

Structure

-  -      AC   A        ----  uc 
 UC CCUGAG  CCU ACUCGUGA    gg  u
 || ||||||  ||| ||||||||    ||  u
 ag ggguuc  gga ugggcacu    cc  u
c  a      ga   c        aaaa  uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-125c

• Accession: MIMAT0029399
• Description: Ictalurus punctatus ipu-miR-125c mature miRNA
• Sequence: 1 - UCCCUGAGACCCUAACUCGUGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174