miRBase entry: ipu-mir-129-1

Stem-loop ipu-mir-129-1


Accession
MI0024485
Description
Ictalurus punctatus ipu-mir-129-1 precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

CUUUUUGCGGUCUGGGCUUGCuguuccuugaaccaguagccaggaagcccuuaccccaaaaagua
(((((((.(((..((((((.(((((.((......)).)).))).))))))..))).)))))))..

Structure
--       C   CU      G   -  c  ug 
  CUUUUUG GGU  GGGCUU Cug uu cu  a
  ||||||| |||  |||||| ||| || ||   
  gaaaaac cca  cccgaa gac ga ga  a
au       c   uu      g   c  u  cc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-129

Accession MIMAT0029403
Description Ictalurus punctatus ipu-miR-129 mature miRNA
Sequence 1 - CUUUUUGCGGUCUGGGCUUGC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174