Stem-loop ipu-mir-130c-1

Accession

MI0024489

Description

Ictalurus punctatus ipu-mir-130c-1 precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

GCCCUUUUUCUGUUGUACUacuggccaaucagaagagcagugcaauauuaaaagggcau
((((((((..(((((((((.((.............)).)))))))))..))))))))..

Structure

--        UC         a  ggcca 
  GCCCUUUU  UGUUGUACU cu     a
  ||||||||  ||||||||| ||     u
  cgggaaaa  auaacguga ga     c
ua        uu         c  gaaga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-130c

• Accession: MIMAT0029404
• Description: Ictalurus punctatus ipu-miR-130c mature miRNA
• Sequence: 1 - GCCCUUUUUCUGUUGUACU - 19
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174