miRBase entry: ipu-mir-135c-2

Stem-loop ipu-mir-135c-2


Accession
MI0024499
Description
Ictalurus punctatus ipu-mir-135c-2 precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

UAUGGCUUUCUAUUCCUAUGUGAuuuugauaugauguaucauguaggguucaaagccauuag
.((((((((....(((((((((((.............)))))))))))...))))))))...

Structure
--U        CUAU           uuuga 
   AUGGCUUU    UCCUAUGUGAu     u
   ||||||||    |||||||||||     a
   uaccgaaa    gggauguacua     u
gau        -cuu           uguag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-135c

Accession MIMAT0029412
Description Ictalurus punctatus ipu-miR-135c mature miRNA
Sequence 1 - UAUGGCUUUCUAUUCCUAUGUGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174