miRBase entry: ipu-mir-139

Stem-loop ipu-mir-139


Accession
MI0024504
Description
Ictalurus punctatus ipu-mir-139 precursor miRNA
Gene family
MIPF0000117; mir-139


Sequence

UCUACAGUGCAUGUGUCUCCAGUguuucuauggcgacuggggaggcagcgcuguuggaau
((((((((((.(((.(((((((((((.....))).)))))))).))))))))).))))..

Structure
--    -      A   G        -   u 
  UCUA CAGUGC UGU UCUCCAGU guu c
  |||| |||||| ||| |||||||| ||| u
  aggu gucgcg acg agggguca cgg a
ua    u      -   g        g   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-139

Accession MIMAT0029416
Description Ictalurus punctatus ipu-miR-139 mature miRNA
Sequence 1 - UCUACAGUGCAUGUGUCUCCAGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174