miRBase entry: ipu-mir-144

Stem-loop ipu-mir-144


Accession
MI0024510
Description
Ictalurus punctatus ipu-mir-144 precursor miRNA
Gene family
MIPF0000093; mir-144

Literature search
1 open access papers mention ipu-mir-144
(3 sentences)

Sequence

ggauaucaucguauacuguaaguucauuauugagacaCUACAGUAUAGAUGAUGUACU
..((((((((.(((((((((..((((....))))....)))))))))))))))))...

Structure
-gg        g         --ag    u 
   auaucauc uauacugua    uuca u
   |||||||| |||||||||    ||||  
   UGUAGUAG AUAUGACAU    gagu a
UCA        -         Caca    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-144

Accession MIMAT0029421
Description Ictalurus punctatus ipu-miR-144 mature miRNA
Sequence 38 - CUACAGUAUAGAUGAUGUACU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174