miRBase entry: ipu-mir-146a

Stem-loop ipu-mir-146a


Accession
MI0024512
Description
Ictalurus punctatus ipu-mir-146a precursor miRNA
Gene family
MIPF0000103; mir-146


Sequence

UGAGAACUGAAUUCCAUAGAUGGuguucaugaaaaguucaucuaugggcucaguucuu
.(((((((((..(((((((((((..............))))))))))).)))))))))

Structure
U         AU           uguuca 
 GAGAACUGA  UCCAUAGAUGG      u
 |||||||||  |||||||||||       
 uucuugacu  ggguaucuacu      g
-         -c           ugaaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-146a

Accession MIMAT0029423
Description Ictalurus punctatus ipu-miR-146a mature miRNA
Sequence 1 - UGAGAACUGAAUUCCAUAGAUGG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174