miRBase entry: ipu-mir-153b

Stem-loop ipu-mir-153b


Accession
MI0024517
Description
Ictalurus punctatus ipu-mir-153b precursor miRNA
Gene family
MIPF0000050; mir-153

Literature search
1 open access papers mention ipu-mir-153b
(2 sentences)

Sequence

ucauuuuugugguuugcagcuaguagucugguuccagUUGCAUAGUCACAAAAAUGAGC
(((((((((((((((((((((.(..........).))))))).))))))))))))))..

Structure
--              -       a uagu 
  ucauuuuugugguu ugcagcu g    c
  |||||||||||||| ||||||| |     
  AGUAAAAACACUGA ACGUUga c    u
CG              U       c uugg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-153b

Accession MIMAT0029428
Description Ictalurus punctatus ipu-miR-153b mature miRNA
Sequence 38 - UUGCAUAGUCACAAAAAUGAGC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174