miRBase entry: ipu-mir-15a-1

Stem-loop ipu-mir-15a-1


Accession
MI0024519
Description
Ictalurus punctatus ipu-mir-15a-1 precursor miRNA
Gene family
MIPF0000006; mir-15


Sequence

UAGCAGCACAGAAUGGUUUGUgaguuauaacgggggugcaggccguacugugcugcggc
..(((((((((.(((((((((................))))))))).)))))))))...

Structure
-UA         A         gaguuau 
   GCAGCACAG AUGGUUUGU       a
   ||||||||| |||||||||        
   cgucguguc ugccggacg       a
cgg         a         ugggggc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-15a

Accession MIMAT0029430
Description Ictalurus punctatus ipu-miR-15a mature miRNA
Sequence 1 - UAGCAGCACAGAAUGGUUUGU - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174