miRBase entry: ipu-mir-15b

Stem-loop ipu-mir-15b


Accession
MI0024521
Description
Ictalurus punctatus ipu-mir-15b precursor miRNA
Gene family
MIPF0000006; mir-15


Sequence

UAGCAGCACAUCAUGGUUUGUAaguuauaagggcaaauuccgaaucaugaugugcugucacu
..((((((((((((((((((.((..............)).))))))))))))))))))....

Structure
--UA                  U  guuaua 
    GCAGCACAUCAUGGUUUG Aa      a
    |||||||||||||||||| ||       
    ugucguguaguacuaagc uu      g
ucac                  c  aaacgg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-15b

Accession MIMAT0029431
Description Ictalurus punctatus ipu-miR-15b mature miRNA
Sequence 1 - UAGCAGCACAUCAUGGUUUGUA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174