Stem-loop ipu-mir-17a

Accession

MI0024524

Description

Ictalurus punctatus ipu-mir-17a precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

caaagugcuuacagugcagguaguauuauggaauaucuACUGCAGUGGAGGCACUUCUAG
..(((((((..((.(((((.(((((((....)))).)))))))).))..)))))))....

Structure

--ca       ua  g     g   -    a 
    aagugcu  ca ugcag uag uauu u
    |||||||  || ||||| ||| ||||  
    UUCACGG  GU ACGUC Auc auaa g
GAUC       AG  G     -   u    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-17a

• Accession: MIMAT0029434
• Description: Ictalurus punctatus ipu-miR-17a mature miRNA
• Sequence: 39 - ACUGCAGUGGAGGCACUUCUAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174