Stem-loop ipu-mir-17b

Accession

MI0024525

Description

Ictalurus punctatus ipu-mir-17b precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

caaagugcuuacagugcagguaguucaauauaaucuACUGCAGUGGAGGCACUUCAAGC
..(((((((..((.(((((.(((...........)))))))).))..))))))).....

Structure

---ca       ua  g     g   uuca 
     aagugcu  ca ugcag uag    a
     |||||||  || ||||| |||    u
     UUCACGG  GU ACGUC Auc    a
CGAAC       AG  G     -   uaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-17b

• Accession: MIMAT0029435
• Description: Ictalurus punctatus ipu-miR-17b mature miRNA
• Sequence: 37 - ACUGCAGUGGAGGCACUUCAAGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174