miRBase entry: ipu-mir-181a-1

Stem-loop ipu-mir-181a-1


Accession
MI0024526
Description
Ictalurus punctatus ipu-mir-181a-1 precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
1 open access papers mention ipu-mir-181a-1
(5 sentences)

Sequence

AACAUUCAACGCUGUCGGUGAGuuugagcuaaauggaaaaaaaccaucgaccguugauuguacc
.(((.((((((..(((((((.((((...((....))....))))))))))))))))).)))...

Structure
--A   U      CU       A    -gag  a 
   ACA UCAACG  GUCGGUG Guuu    cu a
   ||| ||||||  ||||||| ||||    ||  
   ugu aguugc  cagcuac caaa    gg a
cca   u      --       -    aaaa  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-181a

Accession MIMAT0029436
Description Ictalurus punctatus ipu-miR-181a mature miRNA
Sequence 1 - AACAUUCAACGCUGUCGGUGAG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174