miRBase entry: ipu-mir-181a-4

Stem-loop ipu-mir-181a-4


Accession
MI0024529
Description
Ictalurus punctatus ipu-mir-181a-4 precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
1 open access papers mention ipu-mir-181a-4
(5 sentences)

Sequence

AACAUUCAACGCUGUCGGUGAGuuuggaugcauaauaaaccaucgaccguuggcugugcc
.(((.((((((..(((((((.(((((.........)))))))))))))))))).)))...

Structure
--A   U      CU       A     gau 
   ACA UCAACG  GUCGGUG Guuug   g
   ||| ||||||  ||||||| |||||   c
   ugu gguugc  cagcuac caaau   a
ccg   c      --       -     aau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-181a

Accession MIMAT0029436
Description Ictalurus punctatus ipu-miR-181a mature miRNA
Sequence 1 - AACAUUCAACGCUGUCGGUGAG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174