Stem-loop ipu-mir-18a

Accession

MI0024538

Description

Ictalurus punctatus ipu-mir-18a precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

UAAGGUGCAUCUAGUGCAGAuagugaaguagacuagcaccuacugcccuaagugcuccuucug
.((((.((((.(((.((((.(((((...........)).))))))).))).)))).))))...

Structure

--U    U    C   U    A   -  aagu 
   AAGG GCAU UAG GCAG uag ug    a
   |||| |||| ||| |||| ||| ||    g
   uucc cgug auc cguc auc ac    a
guc    u    a   c    -   c  gauc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-18a

• Accession: MIMAT0029443
• Description: Ictalurus punctatus ipu-miR-18a mature miRNA
• Sequence: 1 - UAAGGUGCAUCUAGUGCAGA - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174