miRBase entry: ipu-mir-194a

Stem-loop ipu-mir-194a


Accession
MI0024542
Description
Ictalurus punctatus ipu-mir-194a precursor miRNA
Gene family
MIPF0000055; mir-194


Sequence

UGUAACAGCAACUCCAUGUGGAagguuugugucuuccaguggagcugcuguugcgug
.(((((((((.((((((.(((((((......))))))))))))).)))))))))...

Structure
--U         A      G       uu 
   GUAACAGCA CUCCAU UGGAagg  u
   ||||||||| |||||| |||||||   
   cguugucgu gaggug accuucu  g
gug         c      -       gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-194a

Accession MIMAT0029447
Description Ictalurus punctatus ipu-miR-194a mature miRNA
Sequence 1 - UGUAACAGCAACUCCAUGUGGA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174