miRBase entry: ipu-mir-196d-1

Stem-loop ipu-mir-196d-1


Accession
MI0024545
Description
Ictalurus punctatus ipu-mir-196d-1 precursor miRNA
Gene family
MIPF0000031; mir-196


Sequence

UAGGUAGUUUUAUGUUGUUGGGCucuauuuuauauccccgcaacacgaaacugucuuaa
(((((((((((.((((((.(((.............))).)))))).))))))).)))).

Structure
-    -       A      U   Cucua 
 UAGG UAGUUUU UGUUGU GGG     u
 |||| ||||||| |||||| |||     u
 auuc gucaaag acaacg ccc     u
a    u       c      c   uauau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-196d

Accession MIMAT0029449
Description Ictalurus punctatus ipu-miR-196d mature miRNA
Sequence 1 - UAGGUAGUUUUAUGUUGUUGGGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174