Stem-loop ipu-mir-199a-3

Accession

MI0024550

Description

Ictalurus punctatus ipu-mir-199a-3 precursor miRNA

Gene family

MIPF0000040; mir-199

Sequence

CCCAGUGUUCAGACUACCUGUUCaucaugcugcagcugaacaguaguccgcacauugguu
.(((((((.(.((((((.((((((.(........).)))))))))))).).)))))))..

Structure

-C       U A      C      u aug 
  CCAGUGU C GACUAC UGUUCa c   c
  ||||||| | |||||| |||||| |    
  gguuaca g cugaug acaagu g   u
uu       c c      -      c acg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-199a-5p

• Accession: MIMAT0029450
• Description: Ictalurus punctatus ipu-miR-199a-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUUC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174