miRBase entry: ipu-mir-19b

Stem-loop ipu-mir-19b


Accession
MI0024553
Description
Ictalurus punctatus ipu-mir-19b precursor miRNA
Gene family
MIPF0000011; mir-19


Sequence

AGUUUUGCUGGUUUGCAUUCAGCuuuuaagacugugcgcugugcaaauccaugcaaaacuga
((((((((((((((((((...((............))...))))))).))).))))))))..

Structure
--        -   -       UCA  uuuua 
  AGUUUUGC UGG UUUGCAU   GC     a
  |||||||| ||| |||||||   ||      
  ucaaaacg acc aaacgug   cg     g
ag        u   u       ucg  uguca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-19b

Accession MIMAT0029452
Description Ictalurus punctatus ipu-miR-19b mature miRNA
Sequence 1 - AGUUUUGCUGGUUUGCAUUCAGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174