Stem-loop ipu-mir-21-1

Accession

MI0024567

Description

Ictalurus punctatus ipu-mir-21-1 precursor miRNA

Gene family

MIPF0000060; mir-21

Sequence

UAGCUUAUCAGACUGGUGUUGGCuguuacauucgcccggcgacaacagucuguaggcugucu
(((((((.(((((((.(((((.(((...........)))))))).))))))))))))))...

Structure

---       U       G     G   uuac 
   UAGCUUA CAGACUG UGUUG Cug    a
   ||||||| ||||||| ||||| |||    u
   gucggau gucugac acagc ggc    u
ucu       -       a     -   ccgc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-21

• Accession: MIMAT0029463
• Description: Ictalurus punctatus ipu-miR-21 mature miRNA
• Sequence: 1 - UAGCUUAUCAGACUGGUGUUGGC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174