miRBase entry: ipu-mir-214

Stem-loop ipu-mir-214


Accession
MI0024572
Description
Ictalurus punctatus ipu-mir-214 precursor miRNA
Gene family
MIPF0000062; mir-214


Sequence

ugccugucuacacuugcugugcagaacuuccugcaccuguACAGCAGGCACAGACAGGCAGA
(((((((((...((((((((((((............))))))))))))...)))))))))..

Structure
--         aca            aacuu 
  ugccugucu   cuugcugugcag     c
  |||||||||   ||||||||||||      
  ACGGACAGA   GGACGACAuguc     c
AG         CAC            cacgu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-214

Accession MIMAT0029466
Description Ictalurus punctatus ipu-miR-214 mature miRNA
Sequence 41 - ACAGCAGGCACAGACAGGCAGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174