Stem-loop ipu-mir-216a

Accession

MI0024573

Description

Ictalurus punctatus ipu-mir-216a precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

UAAUCUCAGCUGGCAACUGUGAguaguguuuucaucccucucacaggcgcugcugggguucug
.(((((((((.(((..(((((((..(((....)))....)))))))..))))))))))))...

Structure

--U         U   AA       --ua   u 
   AAUCUCAGC GGC  CUGUGAg    gug u
   ||||||||| |||  |||||||    |||  
   uuggggucg ucg  gacacuc    uac u
guc         -   cg       uccc   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-216a

• Accession: MIMAT0029467
• Description: Ictalurus punctatus ipu-miR-216a mature miRNA
• Sequence: 1 - UAAUCUCAGCUGGCAACUGUGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174