Stem-loop ipu-mir-218a-2

Accession

MI0024579

Description

Ictalurus punctatus ipu-mir-218a-2 precursor miRNA

Gene family

MIPF0000026; mir-218

Sequence

UUGUGCUUGAUCUAACCAUGugguugcagacucagacuaauacaugguucugucaagcaccaug
..(((((((((..((((((((((((.........))))...))))))))..)))))))))....

Structure

--UU         CU        ---    gca 
    GUGCUUGAU  AACCAUGu   gguu   g
    |||||||||  ||||||||   ||||   a
    cacgaacug  uugguaca   ucag   c
guac         uc        uaa    acu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-218a

• Accession: MIMAT0029472
• Description: Ictalurus punctatus ipu-miR-218a mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUG - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174